Publications after 2017

for previous publications see here

2020

• R. Amyot, H. Flechsig
  BioAFMviewer: an interactive interface for simulated AFM scanning of biomolecular structures and dynamics.
  PLoS Comput Biol 16(11): e1008444 (2020)
  citations: 2
  - EurekAlert! press release, asia RESEARCH NEWS, ScienceDaily, Phys.org
  

• Y. Hosaka, S. Komura, A.S. Mikhailov
  Mechanochemical enzymes and protein machines as hydrodynamic force dipoles: the active dimer model.
  Soft Matter 16, 10734 (2020)
  citations: 1

• D. Loutchko, H. Flechsig
  Allosteric communication in molecular machines via information exchange: what can be learned from dynamical modeling.
  Biophys Rev 12, 443-452 (2020)
  Springer Nature ShareIt (full-text view-only)
  citations: 6

• Y. Koyano, H. Kitahata, A.S. Mikhailov
  Diffusion in crowded colloids of particles cyclically changing their shapes.
  Europhysics Letters 128, 40003 (2020)
  citations: 1

2019

• Y. Koyano, H. Kitahata, A.S. Mikhailov
  Diffusion in cells or biomembranes ― diffusion enhancement and drift induced by hydrodynamical collective effect.
  Butsuri 74(9), 627 (2019)
  citations: 0

• J.K. Noel, F. Noe, O. Daumke, A.S. Mikhailov
  Polymer-like model to study the dynamics of dynamin filaments on deformable membrane tubes.
  Biophys. J. 117, 1870-1891 (2019)
  citations: 2

• R. Amyot, Y. Togashi, H. Flechsig
  Analyzing fluctuation properties in protein elastic networks with sequence-specific and distance-dependent interactions.
  Biomolecules 9(10), 549 (2019)
  citations: 0

• H. Flechsig, A.S. Mikhailov
  Simple mechanics of protein machines.
  J. Roy. Soc. Interface 16: 20190244 (2019)
  citations: 11
  - EurekAlert! press release
  - covered in Science Daily, Phys.org, 7th Space

2018

• Y. Togashi, H. Flechsig
  Coarse-grained protein dynamics studies using elastic network models.
  Int. J. Mol. Sci. 19(12):3899 (2018)
  citations: 7

• H. Flechsig, Y. Togashi
  Designed Elastic Networks: Models of Complex Protein Machinery.
  Int. J. Mol. Sci. 19(10):3152 (2018)
  citations: 12

2017

• L. Dai, H. Flechsig, J. Yu
  Deciphering intrinsic inter-subunit couplings that lead to sequential hydrolysis of F1-ATPase ring.
  Biophysical Journal 113:1440-1453 (2017)
  - article highlighted with Video on the BJ website
  citations: 5

• H. Flechsig
  Design of elastic networks with evolutionary optimized long-range communication as mechanical models of allosteric proteins.
  Biophysical Journal 113:558-571 (2017)
  - most read article in August
  - article highlighted with Video on the BJ website
  citations: 35

• K. Yasuda, R. Okamoto, S. Komura, A.S. Mikhailov
  Localization and diffusion of tracer particles in viscoelastic media with active force dipoles.
  Europhysics Letters 117, 38001 (2017)
  citations: 9

• D. Loutchko, M. Eisbach, A.S. Mikhailov
  Stochastic thermodynamics of a chemical nanomachine: The channeling enzyme tryptophan synthase.
  J. Chem. Phys. 146, 025101 (2017)
  citations: 8

• A.S. Mikhailov, Y. Koyano, H. Kitahata
  Hydrodynamic Effects in Oscillatory Active Nematics.
  J. Phys. Soc. Jpn. 86, 101013 (2017)
  citations: 5